Copick Tomogram Visualization Server

Run this script

uv run https://atrium.kyleharrington.com/cryoet/copick-torch-inspector/main.py

Dependencies

  • numpy
  • matplotlib
  • fastapi
  • uvicorn
  • zarr<3
  • numcodecs<0.16.0
  • copick>=0.8.0
  • copick-torch @ git+https://github.com/copick/copick-torch.git
  • copick-server @ git+https://github.com/copick/copick-server.git